IL_8VR4_119

3D structure

PDB id

8VR4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and erythromycin:50S-HflX-A-Ery

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

GAUAAC*GGGAAAC

Length

13 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VR4|1|A|G|2961
8VR4|1|A|A|2962
8VR4|1|A|U|2963
8VR4|1|A|A|2964
8VR4|1|A|A|2965
8VR4|1|A|C|2966
*
8VR4|1|A|G|2985
8VR4|1|A|G|2986
8VR4|1|A|G|2987
8VR4|1|A|A|2988
8VR4|1|A|A|2989
8VR4|1|A|A|2990
8VR4|1|A|C|2991

Current chains

Chain A

23S ribosomal RNA

Nearby chains

Chain G

50S ribosomal protein L6

Chain K

50S Ribosomal Protein L13

Chain f

50S ribosomal protein L36