IL_8VRL_058

3D structure

PDB id

8VRL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and chloramphenicol:50S-HflX-A-Clm

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

UGAAUC*GGUAGUAG

Length

14 nucleotides

Bulged bases

8VRL|1|A|G|1541, 8VRL|1|A|A|1628, 8VRL|1|A|G|1629

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VRL|1|A|U|1540
8VRL|1|A|G|1541
8VRL|1|A|A|1542
8VRL|1|A|A|1543
8VRL|1|A|U|1544
8VRL|1|A|C|1545
*
8VRL|1|A|G|1625
8VRL|1|A|G|1626
8VRL|1|A|U|1627
8VRL|1|A|A|1628
8VRL|1|A|G|1629
8VRL|1|A|U|1630
8VRL|1|A|A|1631
8VRL|1|A|G|1632

Current chains

Chain A

23S ribosomal RNA

Nearby chains