IL_8VRL_096

3D structure

PDB id

8VRL (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and chloramphenicol:50S-HflX-A-Clm

Experimental method

ELECTRON MICROSCOPY

Resolution

3.33 Å

Loop

Sequence

GACUGUGAAGCUC*GGGUGGAGUC

Length

23 nucleotides

Bulged bases

8VRL|1|A|G|2354, 8VRL|1|A|U|2355, 8VRL|1|A|A|2381

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VRL|1|A|G|2350
8VRL|1|A|A|2351
8VRL|1|A|C|2352
8VRL|1|A|U|2353
8VRL|1|A|G|2354
8VRL|1|A|U|2355
8VRL|1|A|G|2356
8VRL|1|A|A|2357
8VRL|1|A|A|2358
8VRL|1|A|G|2359
8VRL|1|A|C|2360
8VRL|1|A|U|2361
8VRL|1|A|C|2362
*
8VRL|1|A|G|2375
8VRL|1|A|G|2376
8VRL|1|A|G|2377
8VRL|1|A|U|2378
8VRL|1|A|G|2379
8VRL|1|A|G|2380
8VRL|1|A|A|2381
8VRL|1|A|G|2382
8VRL|1|A|U|2383
8VRL|1|A|C|2384

Current chains

Chain A

23S ribosomal RNA

Nearby chains