IL_8VRL_099
3D structure
- PDB id
- 8VRL (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Structure of Mycobacterium smegmatis 50S ribosomal subunit bound to HflX and chloramphenicol:50S-HflX-A-Clm
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.33 Å
Loop
- Sequence
- CGAG*CGAG
- Length
- 8 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VRL_099 not in the Motif Atlas
- Homologous match to IL_7A0S_081
- Geometric discrepancy: 0.1503
- The information below is about IL_7A0S_081
- Detailed Annotation
- Double sheared
- Broad Annotation
- Double sheared
- Motif group
- IL_58355.2
- Basepair signature
- cWW-tSH-tHS-cWW
- Number of instances in this motif group
- 43
Unit IDs
8VRL|1|A|C|2574
8VRL|1|A|G|2575
8VRL|1|A|A|2576
8VRL|1|A|G|2577
*
8VRL|1|A|C|2588
8VRL|1|A|G|2589
8VRL|1|A|A|2590
8VRL|1|A|G|2591
Current chains
- Chain A
- 23S ribosomal RNA
Nearby chains
- Chain X
- 50S ribosomal protein L27
- Chain e
- 50S ribosomal protein L35
Coloring options: