IL_8VSA_206

3D structure

PDB id

8VSA (explore in PDB, NAKB, or RNA 3D Hub)

Description

Endogenous trans-translation complex with tmRNA*SmpB in the P site and alanyl-tRNA in the A site of E. coli 70S ribosome

Experimental method

ELECTRON MICROSCOPY

Resolution

3.7 Å

Loop

Sequence

GUUAGU*AGCUGGC

Length

13 nucleotides

Bulged bases

8VSA|1|TMRN|G|256

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VSA|1|TMRN|G|252
8VSA|1|TMRN|U|253
8VSA|1|TMRN|U|254
8VSA|1|TMRN|A|255
8VSA|1|TMRN|G|256
8VSA|1|TMRN|U|257
*
8VSA|1|TMRN|A|273
8VSA|1|TMRN|G|274
8VSA|1|TMRN|C|275
8VSA|1|TMRN|U|276
8VSA|1|TMRN|G|277
8VSA|1|TMRN|G|278
8VSA|1|TMRN|C|279

Current chains

Chain TMRN

TMRN

Nearby chains