IL_8VTV_043

3D structure

PDB id

8VTV (explore in PDB, NAKB, or RNA 3D Hub)

Description

Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-91, mRNA, aminoacylated A-site Phe-tRNAphe, aminoacylated P-site fMet-tRNAmet, and deacylated E-site tRNAphe at 2.55A resolution

Experimental method

X-RAY DIFFRACTION

Resolution

2.55 Å

Loop

Sequence

GUGGC*GCCAUC

Length

11 nucleotides

Bulged bases

None detected

QA status

Missing nucleotides

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VTV|1|1A|G|1059
8VTV|1|1A|U|1060
8VTV|1|1A|G|1062
8VTV|1|1A|G|1063
8VTV|1|1A|C|1064
*
8VTV|1|1A|G|1074
8VTV|1|1A|C|1075
8VTV|1|1A|C|1076
8VTV|1|1A|A|1077
8VTV|1|1A|U|1078
8VTV|1|1A|C|1079

Current chains

Chain 1A

23S Ribosomal RNA

Nearby chains