IL_8VTW_202
3D structure
- PDB id
- 8VTW (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Crystal structure of the wild-type Thermus thermophilus 70S ribosome in complex with macrolone MCX-128 and protein Y at 2.35A resolution
- Experimental method
- X-RAY DIFFRACTION
- Resolution
- 2.35 Å
Loop
- Sequence
- GCACU*AAAC
- Length
- 9 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VTW_202 not in the Motif Atlas
- Homologous match to IL_8VTW_028
- Geometric discrepancy: 0.0486
- The information below is about IL_8VTW_028
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_02509.3
- Basepair signature
- cWW-cWS-cWW-cWW-R-cSH-tWH-R
- Number of instances in this motif group
- 6
Unit IDs
8VTW|1|2A|G|864
8VTW|1|2A|C|865
8VTW|1|2A|A|866
8VTW|1|2A|C|867
8VTW|1|2A|U|868
*
8VTW|1|2A|A|909
8VTW|1|2A|A|910
8VTW|1|2A|A|911
8VTW|1|2A|C|912
Current chains
- Chain 2A
- 23S Ribosomal RNA
Nearby chains
- Chain 2B
- 5S ribosomal RNA; 5S rRNA
- Chain 2Q
- 50S ribosomal protein L16
- Chain 2Z
- 50S ribosomal protein L25
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