IL_8VUP_050

3D structure

PDB id

8VUP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UAAGCG*CGUGAUG

Length

13 nucleotides

Bulged bases

8VUP|1|1|U|1523

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VUP|1|1|U|1468
8VUP|1|1|A|1469
8VUP|1|1|A|1470
8VUP|1|1|G|1471
8VUP|1|1|C|1472
8VUP|1|1|G|1473
*
8VUP|1|1|C|1518
8VUP|1|1|G|1519
8VUP|1|1|U|1520
8VUP|1|1|G|1521
8VUP|1|1|A|1522
8VUP|1|1|U|1523
8VUP|1|1|G|1524

Current chains

Chain 1

23S ribosomal RNA

Nearby chains