IL_8VUP_096
3D structure
- PDB id
- 8VUP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- UCACU*AAA
- Length
- 8 nucleotides
- Bulged bases
- 8VUP|1|1|A|2726
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VUP_096 not in the Motif Atlas
- Geometric match to IL_7A0S_095
- Geometric discrepancy: 0.2027
- The information below is about IL_7A0S_095
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.11
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 19
Unit IDs
8VUP|1|1|U|2680
8VUP|1|1|C|2681
8VUP|1|1|A|2682
8VUP|1|1|C|2683
8VUP|1|1|U|2684
*
8VUP|1|1|A|2725
8VUP|1|1|A|2726
8VUP|1|1|A|2727
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain C
- 50S ribosomal protein L3
- Chain K
- 50S ribosomal protein L14
- Chain N
- Large ribosomal subunit protein bL17
- Chain P
- 50S ribosomal protein L19
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