IL_8VUP_119

3D structure

PDB id

8VUP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UGAAGAAGGC*GUUGUAAAG

Length

19 nucleotides

Bulged bases

None detected

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VUP|1|2|U|409
8VUP|1|2|G|410
8VUP|1|2|A|411
8VUP|1|2|A|412
8VUP|1|2|G|413
8VUP|1|2|A|414
8VUP|1|2|A|415
8VUP|1|2|G|416
8VUP|1|2|G|417
8VUP|1|2|C|418
*
8VUP|1|2|G|425
8VUP|1|2|U|426
8VUP|1|2|U|427
8VUP|1|2|G|428
8VUP|1|2|U|429
8VUP|1|2|A|430
8VUP|1|2|A|431
8VUP|1|2|A|432
8VUP|1|2|G|433

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain i

30S ribosomal protein S4