IL_8VUP_142

3D structure

PDB id

8VUP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CUGCAUG*CAUGG

Length

12 nucleotides

Bulged bases

8VUP|1|2|C|1054

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VUP|1|2|C|1051
8VUP|1|2|U|1052
8VUP|1|2|G|1053
8VUP|1|2|C|1054
8VUP|1|2|A|1055
8VUP|1|2|U|1056
8VUP|1|2|G|1057
*
8VUP|1|2|C|1203
8VUP|1|2|A|1204
8VUP|1|2|U|1205
8VUP|1|2|G|1206
8VUP|1|2|G|1207

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain h

Small ribosomal subunit protein uS3

Chain s

Small ribosomal subunit protein uS14