IL_8VUP_146

3D structure

PDB id

8VUP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

UUGUUGC*GAACUCAA

Length

15 nucleotides

Bulged bases

8VUP|1|2|U|1126

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VUP|1|2|U|1122
8VUP|1|2|U|1123
8VUP|1|2|G|1124
8VUP|1|2|U|1125
8VUP|1|2|U|1126
8VUP|1|2|G|1127
8VUP|1|2|C|1128
*
8VUP|1|2|G|1144
8VUP|1|2|A|1145
8VUP|1|2|A|1146
8VUP|1|2|C|1147
8VUP|1|2|U|1148
8VUP|1|2|C|1149
8VUP|1|2|A|1150
8VUP|1|2|A|1151

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain n

Small ribosomal subunit protein uS9

Chain o

30S ribosomal protein S10