IL_8VUP_152

3D structure

PDB id

8VUP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCGCCC*GUAACAAG

Length

14 nucleotides

Bulged bases

8VUP|1|2|C|1400, 8VUP|1|2|U|1498, 8VUP|1|2|A|1503

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VUP|1|2|C|1399
8VUP|1|2|C|1400
8VUP|1|2|G|1401
8VUP|1|2|C|1402
8VUP|1|2|C|1403
8VUP|1|2|C|1404
*
8VUP|1|2|G|1497
8VUP|1|2|U|1498
8VUP|1|2|A|1499
8VUP|1|2|A|1500
8VUP|1|2|C|1501
8VUP|1|2|A|1502
8VUP|1|2|A|1503
8VUP|1|2|G|1504

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain 4

mRNA