IL_8VUP_156

3D structure

PDB id

8VUP (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified tRNAPro(GGG) in the e*/E conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

AAGAAGUA*UACCACU

Length

15 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VUP|1|2|A|1430
8VUP|1|2|A|1431
8VUP|1|2|G|1432
8VUP|1|2|A|1433
8VUP|1|2|A|1434
8VUP|1|2|G|1435
8VUP|1|2|U|1436
8VUP|1|2|A|1437
*
8VUP|1|2|U|1464
8VUP|1|2|A|1465
8VUP|1|2|C|1466
8VUP|1|2|C|1467
8VUP|1|2|A|1468
8VUP|1|2|C|1469
8VUP|1|2|U|1470

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain 1

Large subunit ribosomal RNA; LSU rRNA

Chain K

50S ribosomal protein L14

Chain P

50S ribosomal protein L19

Chain y

30S ribosomal protein S20