IL_8VV4_023
3D structure
- PDB id
- 8VV4 (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.4 Å
Loop
- Sequence
- AAUUC*GUUAU
- Length
- 10 nucleotides
- Bulged bases
- 8VV4|1|1|U|846, 8VV4|1|1|U|931
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VV4_023 not in the Motif Atlas
- Geometric match to IL_5J7L_399
- Geometric discrepancy: 0.3102
- The information below is about IL_5J7L_399
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_96236.1
- Basepair signature
- cWW-tWW-cWW-L-cWW
- Number of instances in this motif group
- 1
Unit IDs
8VV4|1|1|A|844
8VV4|1|1|A|845
8VV4|1|1|U|846
8VV4|1|1|U|847
8VV4|1|1|C|848
*
8VV4|1|1|G|930
8VV4|1|1|U|931
8VV4|1|1|U|932
8VV4|1|1|A|933
8VV4|1|1|U|934
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain Z
- Large ribosomal subunit protein uL30
Coloring options: