IL_8VV4_039

3D structure

PDB id

8VV4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

CCCAGACAGCC*GGUCGAG

Length

18 nucleotides

Bulged bases

8VV4|1|1|A|1046

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VV4|1|1|C|1043
8VV4|1|1|C|1044
8VV4|1|1|C|1045
8VV4|1|1|A|1046
8VV4|1|1|G|1047
8VV4|1|1|A|1048
8VV4|1|1|C|1049
8VV4|1|1|A|1050
8VV4|1|1|G|1051
8VV4|1|1|C|1052
8VV4|1|1|C|1053
*
8VV4|1|1|G|1106
8VV4|1|1|G|1107
8VV4|1|1|U|1108
8VV4|1|1|C|1109
8VV4|1|1|G|1110
8VV4|1|1|A|1111
8VV4|1|1|G|1112

Current chains

Chain 1

23S ribosomal RNA

Nearby chains

Chain F

50S ribosomal protein L6