IL_8VV4_114

3D structure

PDB id

8VV4 (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon

Experimental method

ELECTRON MICROSCOPY

Resolution

3.4 Å

Loop

Sequence

GG*UGC

Length

5 nucleotides

Bulged bases

8VV4|1|2|G|94

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8VV4_114 not in the Motif Atlas

Geometric match to IL_6JQ5_004

Geometric discrepancy: 0.2813

The information below is about IL_6JQ5_004

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_28408.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

69

Unit IDs

8VV4|1|2|G|75
8VV4|1|2|G|76
*
8VV4|1|2|U|93
8VV4|1|2|G|94
8VV4|1|2|C|95

Current chains

Chain 2

16S ribosomal RNA

Nearby chains