IL_8VVP_029

3D structure

PDB id

8VVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

AUUCAACC*GGCGCAUUU

Length

17 nucleotides

Bulged bases

8VVP|1|WA|U|467, 8VVP|1|WA|U|688

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVP|1|WA|A|466
8VVP|1|WA|U|467
8VVP|1|WA|U|468
8VVP|1|WA|C|469
8VVP|1|WA|A|470
8VVP|1|WA|A|471
8VVP|1|WA|C|472
8VVP|1|WA|C|473
*
8VVP|1|WA|G|682
8VVP|1|WA|G|683
8VVP|1|WA|C|684
8VVP|1|WA|G|685
8VVP|1|WA|C|686
8VVP|1|WA|A|687
8VVP|1|WA|U|688
8VVP|1|WA|U|689
8VVP|1|WA|U|690

Current chains

Chain WA

28S rRNA

Nearby chains

Chain E

L6

Chain PA

L28