IL_8VVP_162

3D structure

PDB id

8VVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGUCCC*GGUCC

Length

11 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVP|1|WA|G|4770
8VVP|1|WA|G|4771
8VVP|1|WA|U|4772
8VVP|1|WA|C|4773
8VVP|1|WA|C|4774
8VVP|1|WA|C|4775
*
8VVP|1|WA|G|4864
8VVP|1|WA|G|4865
8VVP|1|WA|U|4866
8VVP|1|WA|C|4867
8VVP|1|WA|C|4868

Current chains

Chain WA

28S rRNA

Nearby chains

Chain H

L9

Chain N

uL13