IL_8VVP_164

3D structure

PDB id

8VVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GAAACGGGG*CUCUCGC

Length

16 nucleotides

Bulged bases

8VVP|1|WA|C|4897

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVP|1|WA|G|4893
8VVP|1|WA|A|4894
8VVP|1|WA|A|4895
8VVP|1|WA|A|4896
8VVP|1|WA|C|4897
8VVP|1|WA|G|4898
8VVP|1|WA|G|4899
8VVP|1|WA|G|4900
8VVP|1|WA|G|4901
*
8VVP|1|WA|C|4924
8VVP|1|WA|U|4925
8VVP|1|WA|C|4926
8VVP|1|WA|U|4927
8VVP|1|WA|C|4928
8VVP|1|WA|G|4929
8VVP|1|WA|C|4930

Current chains

Chain WA

28S rRNA

Nearby chains

Chain L

eL14

Chain N

uL13