IL_8VVP_170

3D structure

PDB id

8VVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

UCGUACG*UUGAAA

Length

13 nucleotides

Bulged bases

8VVP|1|WA|G|5043

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVP|1|WA|U|5005
8VVP|1|WA|C|5006
8VVP|1|WA|G|5007
8VVP|1|WA|U|5008
8VVP|1|WA|A|5009
8VVP|1|WA|C|5010
8VVP|1|WA|G|5011
*
8VVP|1|WA|U|5041
8VVP|1|WA|U|5042
8VVP|1|WA|G|5043
8VVP|1|WA|A|5044
8VVP|1|WA|A|5045
8VVP|1|WA|A|5046

Current chains

Chain WA

28S rRNA

Nearby chains

Chain B

uL2

Chain CA

L31

Chain V

uL24