IL_8VVP_251
3D structure
- PDB id
- 8VVP (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Codon sampling state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 2.9 Å
Loop
- Sequence
- GCUCAGCGUG*CCGUUGAACCC
- Length
- 21 nucleotides
- Bulged bases
- 8VVP|1|ZA|U|1585, 8VVP|1|ZA|G|1587
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- Not in a motif group
- Basepair signature
- Not available
- Number of instances in this motif group
- 0
Unit IDs
8VVP|1|ZA|G|1541
8VVP|1|ZA|C|1542
8VVP|1|ZA|U|1543
8VVP|1|ZA|C|1544
8VVP|1|ZA|A|1545
8VVP|1|ZA|G|1546
8VVP|1|ZA|C|1547
8VVP|1|ZA|G|1548
8VVP|1|ZA|U|1549
8VVP|1|ZA|G|1550
*
8VVP|1|ZA|C|1582
8VVP|1|ZA|C|1583
8VVP|1|ZA|G|1584
8VVP|1|ZA|U|1585
8VVP|1|ZA|U|1586
8VVP|1|ZA|G|1587
8VVP|1|ZA|A|1588
8VVP|1|ZA|A|1589
8VVP|1|ZA|C|1590
8VVP|1|ZA|C|1591
8VVP|1|ZA|C|1592
Current chains
- Chain ZA
- 18S rRNA
Nearby chains
- Chain DB
- S3
- Chain DC
- uS14
- Chain FB
- S5
- Chain QB
- uS9
- Chain TB
- S19
- Chain UB
- uS10
- Chain ZB
- eS25
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