IL_8VVP_252

3D structure

PDB id

8VVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GUGCCUACC*GUAACC

Length

15 nucleotides

Bulged bases

8VVP|1|ZA|A|1580, 8VVP|1|ZA|C|1581

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVP|1|ZA|G|1550
8VVP|1|ZA|U|1551
8VVP|1|ZA|G|1552
8VVP|1|ZA|C|1553
8VVP|1|ZA|C|1554
8VVP|1|ZA|U|1555
8VVP|1|ZA|A|1556
8VVP|1|ZA|C|1557
8VVP|1|ZA|C|1558
*
8VVP|1|ZA|G|1577
8VVP|1|ZA|U|1578
8VVP|1|ZA|A|1579
8VVP|1|ZA|A|1580
8VVP|1|ZA|C|1581
8VVP|1|ZA|C|1582

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DB

S3

Chain DC

uS14

Chain KB

S10

Chain UB

uS10