IL_8VVP_254

3D structure

PDB id

8VVP (explore in PDB, NAKB, or RNA 3D Hub)

Description

Codon sampling state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

2.9 Å

Loop

Sequence

GGGAUCG*CAUGAAC

Length

14 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVP|1|ZA|G|1604
8VVP|1|ZA|G|1605
8VVP|1|ZA|G|1606
8VVP|1|ZA|A|1607
8VVP|1|ZA|U|1608
8VVP|1|ZA|C|1609
8VVP|1|ZA|G|1610
*
8VVP|1|ZA|C|1629
8VVP|1|ZA|A|1630
8VVP|1|ZA|U|1631
8VVP|1|ZA|G|1632
8VVP|1|ZA|A|1633
8VVP|1|ZA|A|1634
8VVP|1|ZA|C|1635

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain SB

S18

Chain TB

S19

Chain ZB

eS25