IL_8VVR_127
3D structure
- PDB id
- 8VVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UAG*UGGG
- Length
- 7 nucleotides
- Bulged bases
- 8VVR|1|WA|G|4185
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVR_127 not in the Motif Atlas
- Geometric match to IL_8P9A_323
- Geometric discrepancy: 0.1098
- The information below is about IL_8P9A_323
- Detailed Annotation
- No text annotation
- Broad Annotation
- No text annotation
- Motif group
- IL_87316.2
- Basepair signature
- cWW-tHS-cWW
- Number of instances in this motif group
- 13
Unit IDs
8VVR|1|WA|U|3929
8VVR|1|WA|A|3930
8VVR|1|WA|G|3931
*
8VVR|1|WA|U|4183
8VVR|1|WA|G|4184
8VVR|1|WA|G|4185
8VVR|1|WA|G|4186
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain A
- uL2
- Chain M
- eL15
- Chain NA
- eL42
- Chain TA
- Transfer RNA; tRNA
Coloring options: