IL_8VVR_130
3D structure
- PDB id
- 8VVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- GA*UAC
- Length
- 5 nucleotides
- Bulged bases
- 8VVR|1|WA|A|4205
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVR_130 not in the Motif Atlas
- Geometric match to IL_8P9A_325
- Geometric discrepancy: 0.0675
- The information below is about IL_8P9A_325
- Detailed Annotation
- Single bulged A
- Broad Annotation
- No text annotation
- Motif group
- IL_14190.2
- Basepair signature
- cWW-L-cWW
- Number of instances in this motif group
- 160
Unit IDs
8VVR|1|WA|G|4193
8VVR|1|WA|A|4194
*
8VVR|1|WA|U|4204
8VVR|1|WA|A|4205
8VVR|1|WA|C|4206
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain AA
- L29
- Chain I
- L10
- Chain NA
- eL42
- Chain S
- eL21
Coloring options: