IL_8VVR_144

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CAUUG*CCAAGCG

Length

12 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|WA|C|4468
8VVR|1|WA|A|4469
8VVR|1|WA|U|4470
8VVR|1|WA|U|4471
8VVR|1|WA|G|4472
*
8VVR|1|WA|C|4487
8VVR|1|WA|C|4488
8VVR|1|WA|A|4489
8VVR|1|WA|A|4490
8VVR|1|WA|G|4491
8VVR|1|WA|C|4492
8VVR|1|WA|G|4493

Current chains

Chain WA

28S rRNA

Nearby chains

Chain B

uL3

Chain H

L9

Chain LA

eL40

Chain N

uL13

Chain U

L23