IL_8VVR_192

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CUGAC*GGAUG

Length

10 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8VVR_192 not in the Motif Atlas

Geometric match to IL_8CRE_392

Geometric discrepancy: 0.3022

The information below is about IL_8CRE_392

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

IL_12697.1

Basepair signature

cWW-cWW-L-R-tHS-cWW

Number of instances in this motif group

2

Unit IDs

8VVR|1|ZA|C|188
8VVR|1|ZA|U|189
8VVR|1|ZA|G|190
8VVR|1|ZA|A|191
8VVR|1|ZA|C|192
*
8VVR|1|ZA|G|207
8VVR|1|ZA|G|208
8VVR|1|ZA|A|209
8VVR|1|ZA|U|210
8VVR|1|ZA|G|211

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain IB

S8