IL_8VVR_216

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAAAAAUUA*UACCGCAGC

Length

19 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|ZA|G|807
8VVR|1|ZA|A|808
8VVR|1|ZA|A|809
8VVR|1|ZA|A|810
8VVR|1|ZA|A|811
8VVR|1|ZA|A|812
8VVR|1|ZA|A|813
8VVR|1|ZA|U|814
8VVR|1|ZA|U|815
8VVR|1|ZA|A|816
*
8VVR|1|ZA|U|848
8VVR|1|ZA|A|849
8VVR|1|ZA|C|850
8VVR|1|ZA|C|851
8VVR|1|ZA|G|852
8VVR|1|ZA|C|853
8VVR|1|ZA|A|854
8VVR|1|ZA|G|855
8VVR|1|ZA|C|856

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain EB

S4

Chain JB

S9

Chain LB

S11

Chain WB

S15A