IL_8VVR_233
3D structure
- PDB id
- 8VVR (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- ACCA*UCCCU
- Length
- 9 nucleotides
- Bulged bases
- 8VVR|1|ZA|C|1215, 8VVR|1|ZA|C|1216
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVR_233 not in the Motif Atlas
- Geometric match to IL_8CRE_445
- Geometric discrepancy: 0.1324
- The information below is about IL_8CRE_445
- Detailed Annotation
- C-loop
- Broad Annotation
- No text annotation
- Motif group
- IL_63596.12
- Basepair signature
- cWW-cWS-cSH-tWH-cWW-L
- Number of instances in this motif group
- 22
Unit IDs
8VVR|1|ZA|A|1214
8VVR|1|ZA|C|1215
8VVR|1|ZA|C|1216
8VVR|1|ZA|A|1217
*
8VVR|1|ZA|U|1681
8VVR|1|ZA|C|1682
8VVR|1|ZA|C|1683
8VVR|1|ZA|C|1684
8VVR|1|ZA|U|1685
Current chains
- Chain ZA
- 18S rRNA
Nearby chains
- Chain CC
- S28
- Chain FB
- S5
- Chain QB
- uS9
- Chain SA
- Transfer RNA; tRNA
- Chain TA
- Transfer RNA; tRNA
- Chain VA
- mRNA
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