IL_8VVR_237

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACAGGAUUGACA*UUUCUCGAUUC

Length

24 nucleotides

Bulged bases

8VVR|1|ZA|G|1285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|ZA|G|1281
8VVR|1|ZA|A|1282
8VVR|1|ZA|C|1283
8VVR|1|ZA|A|1284
8VVR|1|ZA|G|1285
8VVR|1|ZA|G|1286
8VVR|1|ZA|A|1287
8VVR|1|ZA|U|1288
8VVR|1|ZA|U|1289
8VVR|1|ZA|G|1290
8VVR|1|ZA|A|1291
8VVR|1|ZA|C|1292
8VVR|1|ZA|A|1293
*
8VVR|1|ZA|U|1306
8VVR|1|ZA|U|1307
8VVR|1|ZA|U|1308
8VVR|1|ZA|C|1309
8VVR|1|ZA|U|1310
8VVR|1|ZA|C|1311
8VVR|1|ZA|G|1312
8VVR|1|ZA|A|1313
8VVR|1|ZA|U|1314
8VVR|1|ZA|U|1315
8VVR|1|ZA|C|1316

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DC

uS14

Chain FC

S27A

Chain KB

S10

Chain MB

S12