IL_8VVR_249

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GCUCAGCGUG*CCGUUGAACCC

Length

21 nucleotides

Bulged bases

8VVR|1|ZA|U|1585, 8VVR|1|ZA|G|1587

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|ZA|G|1541
8VVR|1|ZA|C|1542
8VVR|1|ZA|U|1543
8VVR|1|ZA|C|1544
8VVR|1|ZA|A|1545
8VVR|1|ZA|G|1546
8VVR|1|ZA|C|1547
8VVR|1|ZA|G|1548
8VVR|1|ZA|U|1549
8VVR|1|ZA|G|1550
*
8VVR|1|ZA|C|1582
8VVR|1|ZA|C|1583
8VVR|1|ZA|G|1584
8VVR|1|ZA|U|1585
8VVR|1|ZA|U|1586
8VVR|1|ZA|G|1587
8VVR|1|ZA|A|1588
8VVR|1|ZA|A|1589
8VVR|1|ZA|C|1590
8VVR|1|ZA|C|1591
8VVR|1|ZA|C|1592

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DB

S3

Chain DC

uS14

Chain FB

S5

Chain QB

uS9

Chain TB

S19

Chain UB

uS10

Chain ZB

eS25