IL_8VVR_256

3D structure

PDB id

8VVR (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding/Post-hydrolysis state obtained from Anisomycin-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGCU*AAAAG

Length

9 nucleotides

Bulged bases

8VVR|1|ZA|A|1824, 8VVR|1|ZA|A|1825

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVR|1|ZA|C|1708
8VVR|1|ZA|G|1709
8VVR|1|ZA|C|1710
8VVR|1|ZA|U|1711
*
8VVR|1|ZA|A|1822
8VVR|1|ZA|A|1823
8VVR|1|ZA|A|1824
8VVR|1|ZA|A|1825
8VVR|1|ZA|G|1826

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain MA

eL41

Chain UA

Transfer RNA; tRNA

Chain VA

mRNA

Chain WA

Large subunit ribosomal RNA; LSU rRNA

Chain XB

S23