IL_8VVS_029

3D structure

PDB id

8VVS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AUUCAACC*GGCGCAUUU

Length

17 nucleotides

Bulged bases

8VVS|1|WA|U|467, 8VVS|1|WA|U|688

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVS|1|WA|A|466
8VVS|1|WA|U|467
8VVS|1|WA|U|468
8VVS|1|WA|C|469
8VVS|1|WA|A|470
8VVS|1|WA|A|471
8VVS|1|WA|C|472
8VVS|1|WA|C|473
*
8VVS|1|WA|G|682
8VVS|1|WA|G|683
8VVS|1|WA|C|684
8VVS|1|WA|G|685
8VVS|1|WA|C|686
8VVS|1|WA|A|687
8VVS|1|WA|U|688
8VVS|1|WA|U|689
8VVS|1|WA|U|690

Current chains

Chain WA

28S rRNA

Nearby chains

Chain E

L6

Chain PA

L28