IL_8VVS_051

3D structure

PDB id

8VVS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

CGGGG*CGCCGUG

Length

12 nucleotides

Bulged bases

8VVS|1|WA|G|1361, 8VVS|1|WA|C|1380

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVS|1|WA|C|1359
8VVS|1|WA|G|1360
8VVS|1|WA|G|1361
8VVS|1|WA|G|1362
8VVS|1|WA|G|1363
*
8VVS|1|WA|C|1378
8VVS|1|WA|G|1379
8VVS|1|WA|C|1380
8VVS|1|WA|C|1381
8VVS|1|WA|G|1382
8VVS|1|WA|U|1383
8VVS|1|WA|G|1384

Current chains

Chain WA

28S rRNA

Nearby chains

Chain C

uL4

Chain K

eL13

Chain M

eL15

Chain Z

uL15