IL_8VVS_099
3D structure
- PDB id
- 8VVS (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- CGAUC*GGGAG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VVS_099 not in the Motif Atlas
- Geometric match to IL_8P9A_295
- Geometric discrepancy: 0.1886
- The information below is about IL_8P9A_295
- Detailed Annotation
- Triple sheared
- Broad Annotation
- No text annotation
- Motif group
- IL_15190.2
- Basepair signature
- cWW-tSH-tHS-tHS-cWW
- Number of instances in this motif group
- 24
Unit IDs
8VVS|1|WA|C|2591
8VVS|1|WA|G|2592
8VVS|1|WA|A|2593
8VVS|1|WA|U|2594
8VVS|1|WA|C|2595
*
8VVS|1|WA|G|2754
8VVS|1|WA|G|2755
8VVS|1|WA|G|2756
8VVS|1|WA|A|2757
8VVS|1|WA|G|2758
Current chains
- Chain WA
- 28S rRNA
Nearby chains
- Chain A
- uL2
- Chain FA
- L34
- Chain Y
- L27
Coloring options: