IL_8VVS_206

3D structure

PDB id

8VVS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

AGGGCAAGUC*GCU

Length

13 nucleotides

Bulged bases

8VVS|1|ZA|U|607

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVS|1|ZA|A|599
8VVS|1|ZA|G|600
8VVS|1|ZA|G|601
8VVS|1|ZA|G|602
8VVS|1|ZA|C|603
8VVS|1|ZA|A|604
8VVS|1|ZA|A|605
8VVS|1|ZA|G|606
8VVS|1|ZA|U|607
8VVS|1|ZA|C|608
*
8VVS|1|ZA|G|635
8VVS|1|ZA|C|636
8VVS|1|ZA|U|637

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain CB

eS1

Chain DB

S3

Chain EC

S30

Chain JB

S9

Chain XB

S23