IL_8VVS_216

3D structure

PDB id

8VVS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAAAAAUU*ACCGCAGC

Length

17 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVS|1|ZA|G|807
8VVS|1|ZA|A|808
8VVS|1|ZA|A|809
8VVS|1|ZA|A|810
8VVS|1|ZA|A|811
8VVS|1|ZA|A|812
8VVS|1|ZA|A|813
8VVS|1|ZA|U|814
8VVS|1|ZA|U|815
*
8VVS|1|ZA|A|849
8VVS|1|ZA|C|850
8VVS|1|ZA|C|851
8VVS|1|ZA|G|852
8VVS|1|ZA|C|853
8VVS|1|ZA|A|854
8VVS|1|ZA|G|855
8VVS|1|ZA|C|856

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain EB

S4

Chain JB

S9

Chain LB

S11

Chain WB

S15A