IL_8VVS_237

3D structure

PDB id

8VVS (explore in PDB, NAKB, or RNA 3D Hub)

Description

Post-decoding post-hydrolysis state obtained from merged datasets of elongation inhibitor-treated mammalian ribosomes

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GACAGGAUUGACA*UUUCUCGAUUC

Length

24 nucleotides

Bulged bases

8VVS|1|ZA|G|1285

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VVS|1|ZA|G|1281
8VVS|1|ZA|A|1282
8VVS|1|ZA|C|1283
8VVS|1|ZA|A|1284
8VVS|1|ZA|G|1285
8VVS|1|ZA|G|1286
8VVS|1|ZA|A|1287
8VVS|1|ZA|U|1288
8VVS|1|ZA|U|1289
8VVS|1|ZA|G|1290
8VVS|1|ZA|A|1291
8VVS|1|ZA|C|1292
8VVS|1|ZA|A|1293
*
8VVS|1|ZA|U|1306
8VVS|1|ZA|U|1307
8VVS|1|ZA|U|1308
8VVS|1|ZA|C|1309
8VVS|1|ZA|U|1310
8VVS|1|ZA|C|1311
8VVS|1|ZA|G|1312
8VVS|1|ZA|A|1313
8VVS|1|ZA|U|1314
8VVS|1|ZA|U|1315
8VVS|1|ZA|C|1316

Current chains

Chain ZA

18S rRNA

Nearby chains

Chain DC

uS14

Chain FC

S27A

Chain KB

S10

Chain MB

S12