IL_8VWQ_035
3D structure
- PDB id
- 8VWQ (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the closed conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.1 Å
Loop
- Sequence
- UUAAGUG*CUAAA
- Length
- 12 nucleotides
- Bulged bases
- 8VWQ|1|1|A|1143
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8VWQ_035 not in the Motif Atlas
- Geometric match to IL_4WF9_039
- Geometric discrepancy: 0.1355
- The information below is about IL_4WF9_039
- Detailed Annotation
- Kink-turn related
- Broad Annotation
- No text annotation
- Motif group
- IL_57188.6
- Basepair signature
- cWW-tWW-L-tWW-cWW-cSH
- Number of instances in this motif group
- 6
Unit IDs
8VWQ|1|1|U|1018
8VWQ|1|1|U|1019
8VWQ|1|1|A|1020
8VWQ|1|1|A|1021
8VWQ|1|1|G|1022
8VWQ|1|1|U|1023
8VWQ|1|1|G|1024
*
8VWQ|1|1|C|1140
8VWQ|1|1|U|1141
8VWQ|1|1|A|1142
8VWQ|1|1|A|1143
8VWQ|1|1|A|1144
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain J
- 50S ribosomal protein L13
- Chain f
- 50S ribosomal protein L36
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