IL_8VWQ_157

3D structure

PDB id

8VWQ (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the closed conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.1 Å

Loop

Sequence

GAAGUUUU*AGAAUGUGCCUUCGGGAAC

Length

27 nucleotides

Bulged bases

8VWQ|1|2|U|1030, 8VWQ|1|2|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8VWQ|1|2|G|1003
8VWQ|1|2|A|1004
8VWQ|1|2|A|1005
8VWQ|1|2|G|1006
8VWQ|1|2|U|1007
8VWQ|1|2|U|1008
8VWQ|1|2|U|1009
8VWQ|1|2|U|1010
*
8VWQ|1|2|A|1019
8VWQ|1|2|G|1020
8VWQ|1|2|A|1021
8VWQ|1|2|A|1022
8VWQ|1|2|U|1023
8VWQ|1|2|G|1024
8VWQ|1|2|U|1025
8VWQ|1|2|G|1026
8VWQ|1|2|C|1027
8VWQ|1|2|C|1028
8VWQ|1|2|U|1029
8VWQ|1|2|U|1030
8VWQ|1|2|C|1031
8VWQ|1|2|G|1032
8VWQ|1|2|G|1033
8VWQ|1|2|G|1034
8VWQ|1|2|A|1035
8VWQ|1|2|A|1036
8VWQ|1|2|C|1037

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain s

Small ribosomal subunit protein uS14

Chain x

30S ribosomal protein S19