IL_8W2N_101

3D structure

PDB id

8W2N (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

CU*AAG

Length

5 nucleotides

Bulged bases

8W2N|1|1|A|2800

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8W2N_101 not in the Motif Atlas

Geometric match to IL_9DFE_017

Geometric discrepancy: 0.2707

The information below is about IL_9DFE_017

Detailed Annotation

Single bulged A

Broad Annotation

No text annotation

Motif group

IL_14190.2

Basepair signature

cWW-L-cWW

Number of instances in this motif group

160

Unit IDs

8W2N|1|1|C|2795
8W2N|1|1|U|2796
*
8W2N|1|1|A|2799
8W2N|1|1|A|2800
8W2N|1|1|G|2801

Current chains

Chain 1

23S ribosomal RNA

Nearby chains