IL_8W2N_105
3D structure
- PDB id
- 8W2N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- UGUAAG*UUGAG
- Length
- 11 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8W2N_105 not in the Motif Atlas
- Geometric match to IL_5J7L_354
- Geometric discrepancy: 0.102
- The information below is about IL_5J7L_354
- Detailed Annotation
- tHS double platform
- Broad Annotation
- No text annotation
- Motif group
- IL_70411.2
- Basepair signature
- cWW-tSH-L-tHH-L-cWW
- Number of instances in this motif group
- 7
Unit IDs
8W2N|1|1|U|2847
8W2N|1|1|G|2848
8W2N|1|1|U|2849
8W2N|1|1|A|2850
8W2N|1|1|A|2851
8W2N|1|1|G|2852
*
8W2N|1|1|U|2865
8W2N|1|1|U|2866
8W2N|1|1|G|2867
8W2N|1|1|A|2868
8W2N|1|1|G|2869
Current chains
- Chain 1
- 23S ribosomal RNA
Nearby chains
- Chain N
- 50S ribosomal protein L17
- Chain P
- 50S ribosomal protein L19
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