IL_8W2N_132
3D structure
- PDB id
- 8W2N (explore in PDB, NAKB, or RNA 3D Hub)
- Description
- E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)
- Experimental method
- ELECTRON MICROSCOPY
- Resolution
- 3.2 Å
Loop
- Sequence
- CGCAG*UCAGG
- Length
- 10 nucleotides
- Bulged bases
- None detected
- QA status
- Valid loop
Sequence variability
-
If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.
- R3DSVS
Structural variability across Equivalence Class
-
The link below will give the loop's structural variability across the equivalence class for this chain.
- R3DMCS EC
Structural variability across Rfam
-
If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.
- R3DMCS Rfam
- IL_8W2N_132 not in the Motif Atlas
- Geometric match to IL_5J7L_027
- Geometric discrepancy: 0.0889
- The information below is about IL_5J7L_027
- Detailed Annotation
- tSH-tHW-tHS
- Broad Annotation
- No text annotation
- Motif group
- IL_17136.7
- Basepair signature
- cWW-tSH-tHW-tHS-cWW
- Number of instances in this motif group
- 14
Unit IDs
8W2N|1|2|C|580
8W2N|1|2|G|581
8W2N|1|2|C|582
8W2N|1|2|A|583
8W2N|1|2|G|584
*
8W2N|1|2|U|757
8W2N|1|2|C|758
8W2N|1|2|A|759
8W2N|1|2|G|760
8W2N|1|2|G|761
Current chains
- Chain 2
- 16S ribosomal RNA
Nearby chains
- Chain m
- 30S ribosomal protein S8
- Chain q
- 30S ribosomal protein S12
- Chain t
- 30S ribosomal protein S15
- Chain v
- 30S ribosomal protein S17
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