IL_8W2N_150

3D structure

PDB id

8W2N (explore in PDB, NAKB, or RNA 3D Hub)

Description

E. coli 70S ribosome with unmodified Lys-tRNAPro(GGG) in the P/P conformation on a slippery CCC-C codon and Elongation Factor P bound (uL1 in the open conformation)

Experimental method

ELECTRON MICROSCOPY

Resolution

3.2 Å

Loop

Sequence

GAAGUUUU*AGAAUGUGCCUUCGGGAAC

Length

27 nucleotides

Bulged bases

8W2N|1|2|U|1030, 8W2N|1|2|C|1031

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8W2N|1|2|G|1003
8W2N|1|2|A|1004
8W2N|1|2|A|1005
8W2N|1|2|G|1006
8W2N|1|2|U|1007
8W2N|1|2|U|1008
8W2N|1|2|U|1009
8W2N|1|2|U|1010
*
8W2N|1|2|A|1019
8W2N|1|2|G|1020
8W2N|1|2|A|1021
8W2N|1|2|A|1022
8W2N|1|2|U|1023
8W2N|1|2|G|1024
8W2N|1|2|U|1025
8W2N|1|2|G|1026
8W2N|1|2|C|1027
8W2N|1|2|C|1028
8W2N|1|2|U|1029
8W2N|1|2|U|1030
8W2N|1|2|C|1031
8W2N|1|2|G|1032
8W2N|1|2|G|1033
8W2N|1|2|G|1034
8W2N|1|2|A|1035
8W2N|1|2|A|1036
8W2N|1|2|C|1037

Current chains

Chain 2

16S ribosomal RNA

Nearby chains

Chain s

30S ribosomal protein S14