IL_8W51_123

3D structure

PDB id

8W51 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Structure of YchF(H114A) on E.coli 50S ribosomal subunit

Experimental method

ELECTRON MICROSCOPY

Resolution

2.4 Å

Loop

Sequence

GGGAG*CGACCUUGAAAUACC

Length

20 nucleotides

Bulged bases

8W51|1|A|G|2162, 8W51|1|A|A|2163, 8W51|1|A|C|2164, 8W51|1|A|U|2167, 8W51|1|A|U|2172

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8W51|1|A|G|2123
8W51|1|A|G|2124
8W51|1|A|G|2125
8W51|1|A|A|2126
8W51|1|A|G|2127
*
8W51|1|A|C|2161
8W51|1|A|G|2162
8W51|1|A|A|2163
8W51|1|A|C|2164
8W51|1|A|C|2165
8W51|1|A|U|2166
8W51|1|A|U|2167
8W51|1|A|G|2168
8W51|1|A|A|2169
8W51|1|A|A|2170
8W51|1|A|A|2171
8W51|1|A|U|2172
8W51|1|A|A|2173
8W51|1|A|C|2174
8W51|1|A|C|2175

Current chains

Chain A

23S rRNA

Nearby chains