IL_8WHX_082

3D structure

PDB id

8WHX (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

2.8 Å

Loop

Sequence

UUAA*UGAAG

Length

9 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8WHX_082 not in the Motif Atlas

Homologous match to IL_5J7L_317

Geometric discrepancy: 0.1034

The information below is about IL_5J7L_317

Detailed Annotation

UAA/GAN related

Broad Annotation

No text annotation

Motif group

IL_77691.5

Basepair signature

cWW-tSH-L-R-L-cWW

Number of instances in this motif group

7

Unit IDs

8WHX|1|A|U|2081
8WHX|1|A|U|2082
8WHX|1|A|A|2083
8WHX|1|A|A|2084
*
8WHX|1|A|U|2098
8WHX|1|A|G|2099
8WHX|1|A|A|2100
8WHX|1|A|A|2101
8WHX|1|A|G|2102

Current chains

Chain A

23S rRNA

Nearby chains