IL_8WI7_064

3D structure

PDB id

8WI7 (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, bS1 and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

UAG*CG

Length

5 nucleotides

Bulged bases

None detected

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

IL_8WI7_064 not in the Motif Atlas

Geometric match to IL_4V9F_021

Geometric discrepancy: 0.1804

The information below is about IL_4V9F_021

Detailed Annotation

Multiple bulged bases

Broad Annotation

No text annotation

Motif group

IL_71421.3

Basepair signature

cWW-cWW

Number of instances in this motif group

33

Unit IDs

8WI7|1|A|U|1709
8WI7|1|A|A|1710
8WI7|1|A|G|1711
*
8WI7|1|A|C|1719
8WI7|1|A|G|1720

Current chains

Chain A

23S rRNA

Nearby chains

Chain E

50S ribosomal protein L2