IL_8WIB_092

3D structure

PDB id

8WIB (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGUAGGAUAGGUG*CACUC

Length

19 nucleotides

Bulged bases

8WIB|1|A|U|2334, 8WIB|1|A|U|2341

QA status

Unknown status

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WIB|1|A|G|2333
8WIB|1|A|U|2334
8WIB|1|A|G|2335
8WIB|1|A|U|2336
8WIB|1|A|A|2337
8WIB|1|A|G|2338
8WIB|1|A|G|2339
8WIB|1|A|A|2340
8WIB|1|A|U|2341
8WIB|1|A|A|2342
8WIB|1|A|G|2343
8WIB|1|A|G|2344
8WIB|1|A|U|2345
8WIB|1|A|G|2346
*
8WIB|1|A|C|2398
8WIB|1|A|A|2399
8WIB|1|A|C|2400
8WIB|1|A|U|2401
8WIB|1|A|C|2402

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

Transfer RNA; tRNA