IL_8WIC_092

3D structure

PDB id

8WIC (explore in PDB, NAKB, or RNA 3D Hub)

Description

Cryo- EM structure of Mycobacterium smegmatis 50S ribosomal subunit (body 1) of 70S ribosome, E- tRNA and RafH.

Experimental method

ELECTRON MICROSCOPY

Resolution

3.5 Å

Loop

Sequence

GUGUAGGAUAGGUG*CACUC

Length

19 nucleotides

Bulged bases

8WIC|1|A|U|2334, 8WIC|1|A|U|2341

QA status

Valid loop

Sequence variability

If this chain is mapped to an Rfam alignment, the link below will give its sequence variability.

R3DSVS

Structural variability across Equivalence Class

The link below will give the loop's structural variability across the equivalence class for this chain.

R3DMCS EC

Structural variability across Rfam

If this chain is mapped to an Rfam alignment, the link below will give the loop's structural variability between chains mapped to the same Rfam family.

R3DMCS Rfam

Detailed Annotation

No text annotation

Broad Annotation

No text annotation

Motif group

Not in a motif group

Basepair signature

Not available

Number of instances in this motif group

0

Unit IDs

8WIC|1|A|G|2333
8WIC|1|A|U|2334
8WIC|1|A|G|2335
8WIC|1|A|U|2336
8WIC|1|A|A|2337
8WIC|1|A|G|2338
8WIC|1|A|G|2339
8WIC|1|A|A|2340
8WIC|1|A|U|2341
8WIC|1|A|A|2342
8WIC|1|A|G|2343
8WIC|1|A|G|2344
8WIC|1|A|U|2345
8WIC|1|A|G|2346
*
8WIC|1|A|C|2398
8WIC|1|A|A|2399
8WIC|1|A|C|2400
8WIC|1|A|U|2401
8WIC|1|A|C|2402

Current chains

Chain A

23S rRNA

Nearby chains

Chain C

Transfer RNA; tRNA